Publications

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26 entries « 2 of 2 »
21.

Baek, Minkyung; Anishchenko, Ivan; Park, Hahnbeom; Humphreys, Ian R.; Baker, David

Protein oligomer modeling guided by predicted inter-chain contacts in CASP14 Journal Article

In: Proteins, 2021.

Abstract | Links | BibTeX

22.

Norn, Christoffer; Wicky, Basile I. M.; Juergens, David; Liu, Sirui; Kim, David; Tischer, Doug; Koepnick, Brian; Anishchenko, Ivan; Baker, David; Ovchinnikov, Sergey

Protein sequence design by conformational landscape optimization Journal Article

In: Proceedings of the National Academy of Sciences, vol. 118, no. 11, 2021.

Abstract | Links | BibTeX

23.

Hiranuma, Naozumi; Park, Hahnbeom; Baek, Minkyung; Anishchenko, Ivan; Dauparas, Justas; Baker, David

Improved protein structure refinement guided by deep learning based accuracy estimation Journal Article

In: Nature Communications, vol. 12, no. 1340, 2021.

Abstract | Links | BibTeX

24.

Ziatdinov, Maxim; Zhang, Shuai; Dollar, Orion; Pfaendtner, Jim; Mundy, Christopher J.; Li, Xin; Pyles, Harley; Baker, David; De Yoreo, James J.; Kalinin, Sergei V.

Quantifying the Dynamics of Protein Self-Organization Using Deep Learning Analysis of Atomic Force Microscopy Data Journal Article

In: Nano Letters, 2021.

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25.

Yang, Jianyi; Anishchenko, Ivan; Park, Hahnbeom; Peng, Zhenling; Ovchinnikov, Sergey; Baker, David

Improved protein structure prediction using predicted interresidue orientations Journal Article

In: Proceedings of the National Academy of Sciences, 2020, ISBN: 0027-8424.

Abstract | Links | BibTeX

26.

Wu, Qi; Peng, Zhenling; Anishchenko, Ivan; Cong, Qian; Baker, David; Yang, Jianyi

Protein contact prediction using metagenome sequence data and residual neural networks Journal Article

In: Bioinformatics, vol. 36, no. 1, 2019.

Abstract | Links | BibTeX

26 entries « 2 of 2 »