To read an article, click on its title and select the PDF file.

Use the box below to search publications.

439 entries « 9 of 9 »

1997

Grantcharova, V P; Baker, David

Folding dynamics of the src SH3 domain Journal Article

Biochemistry, 36 , pp. 15685-92, 1997, ISSN: 0006-2960.

Abstract | Links | BibTeX

Gu, H; Kim, David E; Baker, David

Contrasting roles for symmetrically disposed beta-turns in the folding of a small protein Journal Article

Journal of molecular biology, 274 , pp. 588-96, 1997, ISSN: 0022-2836.

Abstract | BibTeX

Doyle, R; Simons, K; Qian, H; Baker, David

Local interactions and the optimization of protein folding Journal Article

Proteins, 29 , pp. 282-91, 1997, ISSN: 0887-3585.

Abstract | Links | BibTeX

Riddle, D S; Santiago, J V; Bray-Hall, S T; Doshi, N; Grantcharova, V P; Yi, Q; Baker, David

Functional rapidly folding proteins from simplified amino acid sequences Journal Article

Nature structural biology, 4 , pp. 805-9, 1997, ISSN: 1072-8368.

Abstract | BibTeX

Scalley, M L; Baker, David

Protein folding kinetics exhibit an Arrhenius temperature dependence when corrected for the temperature dependence of protein stability Journal Article

Proceedings of the National Academy of Sciences of the United States of America, 94 , pp. 10636-40, 1997, ISSN: 0027-8424.

Abstract | Links | BibTeX

Han, K F; Bystroff, C; Baker, David

Three-dimensional structures and contexts associated with recurrent amino acid sequence patterns Journal Article

Protein science, 6 , pp. 1587-90, 1997, ISSN: 0961-8368.

Abstract | Links | BibTeX

Simons, K T; Kooperberg, C; Huang, E; Baker, David

Assembly of protein tertiary structures from fragments with similar local sequences using simulated annealing and Bayesian scoring functions Journal Article

Journal of molecular biology, 268 , pp. 209-25, 1997, ISSN: 0022-2836.

Abstract | Links | BibTeX

Scalley, M L; Yi, Q; Gu, H; McCormack, A; Yates, J R; Baker, David

Kinetics of folding of the IgG binding domain of peptostreptococcal protein L. Journal Article

Biochemistry, 36 , pp. 3373-82, 1997, ISSN: 0006-2960.

Abstract | BibTeX

Rank, J A; Baker, David

A desolvation barrier to hydrophobic cluster formation may contribute to the rate-limiting step in protein folding Journal Article

Protein science, 6 , pp. 347-54, 1997, ISSN: 0961-8368.

Abstract | Links | BibTeX

Bystroff, C; Baker, David

Blind predictions of local protein structure in CASP2 targets using the I-sites library Journal Article

Proteins, Suppl 1 , pp. 167-71, 1997, ISSN: 0887-3585.

Abstract | Links | BibTeX

Yi, Q; Scalley, M L; Simons, K T; Gladwin, S T; Baker, David

Characterization of the free energy spectrum of peptostreptococcal protein L Journal Article

Folding & design, 2 , pp. 271-80, 1997, ISSN: 1359-0278.

Abstract | Links | BibTeX

1996

Bystroff, C; Simons, K T; Han, K F; Baker, David

Local sequence-structure correlations in proteins Journal Article

Current opinion in biotechnology, 7 , pp. 417-21, 1996, ISSN: 0958-1669.

Abstract | Links | BibTeX

Han, K F; Baker, David

Global properties of the mapping between local amino acid sequence and local structure in proteins Journal Article

Proceedings of the National Academy of Sciences of the United States of America, 93 , pp. 5814-8, 1996, ISSN: 0027-8424.

Abstract | Links | BibTeX

Yi, Q; Baker, David

Direct evidence for a two-state protein unfolding transition from hydrogen-deuterium exchange, mass spectrometry, and NMR Journal Article

Protein science, 5 , pp. 1060-6, 1996, ISSN: 0961-8368.

Abstract | Links | BibTeX

1995

Han, K F; Baker, David

Recurring local sequence motifs in proteins Journal Article

Journal of molecular biology, 251 , pp. 176-87, 1995, ISSN: 0022-2836.

Abstract | Links | BibTeX

Gu, H; Yi, Q; Bray, S T; Riddle, D S; Shiau, A K; Baker, David

A phage display system for studying the sequence determinants of protein folding Journal Article

Protein science, 4 , pp. 1108-17, 1995, ISSN: 0961-8368.

Abstract | BibTeX

1994

Baker, D; Agard, D A

Influenza hemagglutinin: kinetic control of protein function. Journal Article

Structure (London, England : 1993), 2 , pp. 907-10, 1994, ISSN: 0969-2126.

Abstract | Links | BibTeX

Baker, D; Agard, D A

Kinetics versus thermodynamics in protein folding. Journal Article

Biochemistry, 33 , pp. 7505-9, 1994, ISSN: 0006-2960.

Abstract | Links | BibTeX

1993

Baker, D; Shiau, A K; Agard, D A

The role of pro regions in protein folding. Journal Article

Current Opinion in Cell Biology, 5 , pp. 966-70, 1993, ISSN: 0955-0674.

Abstract | Links | BibTeX

Bystroff, C; Baker, D; Fletterick, R J; Agard, D A

PRISM: application to the solution of two protein structures Journal Article

Acta crystallographica. Section D, 49 , pp. 440-8, 1993, ISSN: 0907-4449.

Abstract | Links | BibTeX

Baker, D; Bystroff, C; Fletterick, R J; Agard, D A

PRISM: topologically constrained phased refinement for macromolecular crystallography Journal Article

Acta crystallographica. Section D, 49 , pp. 429-39, 1993, ISSN: 0907-4449.

Abstract | BibTeX

Ruohola-Baker, H; Grell, E; Chou, T B; Baker, D; Jan, L Y; Jan, Y N

Spatially localized rhomboid is required for establishment of the dorsal-ventral axis in Drosophila oogenesis Journal Article

Cell, 73 , pp. 953-65, 1993, ISSN: 0092-8674.

Abstract | Links | BibTeX

Baker, D; Krukowski, A E; Agard, D A

Uniqueness and the ab initio phase problem in macromolecular crystallography Journal Article

Acta crystallographica. Section D, 49 , pp. 186-92, 1993, ISSN: 0907-4449.

Abstract | Links | BibTeX

D, Baker; HS, Chan; KA, Dill

Coordinate-Space Formulation of Polymer Lattice Cluster Theory Journal Article

Journal of Chemical Physics, 1993.

Links | BibTeX

1992

Baker, D; Silen, J L; Agard, D A

Protease pro region required for folding is a potent inhibitor of the mature enzyme Journal Article

Proteins, 12 , pp. 339-44, 1992, ISSN: 0887-3585.

Abstract | BibTeX

Baker, D; Sohl, J L; Agard, D A

A protein-folding reaction under kinetic control Journal Article

Nature, 356 , pp. 263-5, 1992, ISSN: 0028-0836.

Abstract | BibTeX

1991

Ruohola, H; Bremer, K A; Baker, D; Swedlow, J R; Jan, L Y; Jan, Y N

Role of neurogenic genes in establishment of follicle cell fate and oocyte polarity during oogenesis in Drosophila. Journal Article

Cell, 66 , pp. 433-49, 1991, ISSN: 0092-8674.

Abstract | BibTeX

1990

Baker, D; Wuestehube, L; Schekman, R; Botstein, D; Segev, N

GTP-binding Ypt1 protein and Ca2+ function independently in a cell-free protein transport reaction Journal Article

Proceedings of the National Academy of Sciences of the United States of America, 87 , pp. 355-9, 1990, ISSN: 0027-8424.

Abstract | Links | BibTeX

1989

Baker, D; Schekman, R

Reconstitution of protein transport using broken yeast spheroplasts Journal Article

Methods in Cell Biology, 31 , pp. 127-41, 1989, ISSN: 0091-679X.

BibTeX

1988

Baker, D; Hicke, L; Rexach, M; Schleyer, M; Schekman, R

Reconstitution of SEC gene product-dependent intercompartmental protein transport Journal Article

Cell, 54 , pp. 335-44, 1988, ISSN: 0092-8674.

Abstract | Links | BibTeX

Payne, G S; Baker, D; van Tuinen, E; Schekman, R

Protein transport to the vacuole and receptor-mediated endocytosis by clathrin heavy chain-deficient yeast Journal Article

The Journal of cell biology, 106 , pp. 1453-61, 1988, ISSN: 0021-9525.

Abstract | Links | BibTeX

0000

Journal Article

0000.

BibTeX

Journal Article

0000.

BibTeX

Huang PS Feldmeier K, Parmeggiani Fernandez Velasco DA Höcker Baker F B D

De novo design of a four-fold symmetric TIM-barrel protein with atomic-level accuracy Journal Article

Nature Chemical Biology, 12 (1), pp. 29–34, 0000.

Abstract | Links | BibTeX

Huang, Po-Ssu; Boyken, Scott E; Baker, David

The coming of age of de novo protein design Journal Article

Nature, 537 , pp. 320-327, 0000.

Abstract | Links | BibTeX

Rocklin GJ Chidyausiku TM, Goreshnik Ford Houliston Lemak Carter Ravichandran Mulligan VK Chevalier Arrowsmith CH Baker I A S A L R A D

Global analysis of protein folding using massively parallel design, synthesis, and testing. Journal Article

Science, Vol. 357 , pp. pp. 168-175, 0000.

Abstract | BibTeX

Anishchenko, I; Ovchinnikov, S; Kamisetty, H; Baker, D

Origins of coevolution between residues distant in protein 3D structures Journal Article

Proceedings of the National Academy of Sciences, 114 (34), pp. 9122-9127, 0000.

Links | BibTeX

0000.

BibTeX

0000.

BibTeX

439 entries « 9 of 9 »